Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 AC005052.1-201ENST00000625181 2492 ntBASIC19.2■□□□□ 0.66
SNED1Q8TER0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 AC138028.6-201ENST00000616106 1482 ntBASIC19.2■□□□□ 0.66
SNED1Q8TER0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 MTX1P1-201ENST00000440904 838 ntBASIC19.19■□□□□ 0.66
SNED1Q8TER0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 AKR7A2P1-201ENST00000460134 915 ntBASIC19.19■□□□□ 0.66
SNED1Q8TER0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 EEF1DP1-201ENST00000585891 896 ntBASIC19.19■□□□□ 0.66
SNED1Q8TER0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 AL096828.3-201ENST00000615354 462 ntBASIC19.19■□□□□ 0.66
SNED1Q8TER0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNED1Q8TER0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.19■□□□□ 0.66
SNED1Q8TER0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNED1Q8TER0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.18■□□□□ 0.66
SNED1Q8TER0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC145423.3-201ENST00000615987 467 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms