Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 AC012313.10-201ENST00000623509 926 ntBASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RAB3IL1Q8TBN0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 AC138035.3-201ENST00000622706 2791 ntBASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 AC021097.1-201ENST00000607902 574 ntBASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 NPAP1P7-201ENST00000613027 823 ntBASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
RAB3IL1Q8TBN0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB3IL1Q8TBN0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms