Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 AC253536.4-201ENST00000440539 267 ntBASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 AC093433.1-201ENST00000458048 571 ntBASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 AC011477.6-201ENST00000604980 1927 ntBASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 AL133267.1-201ENST00000398220 340 ntBASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 AKR7A2P1-201ENST00000460134 915 ntBASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 MIR4706-201ENST00000582134 82 ntBASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC24.58■■□□□ 1.53
CFAP43Q8NDM7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
CFAP43Q8NDM7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CFAP43Q8NDM7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
CFAP43Q8NDM7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 HNRNPA1P48-202ENST00000565308 961 ntBASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 MIR3619-201ENST00000579667 83 ntBASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC018892.3-201ENST00000623986 2499 ntBASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 AC106820.2-201ENST00000563775 3264 ntBASIC24.56■■□□□ 1.52
CFAP43Q8NDM7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms