Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 CYP4F24P-201ENST00000586049 1580 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC004987.2-201ENST00000395959 1148 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 EEF1DP4-201ENST00000446006 880 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC004233.3-201ENST00000607794 1269 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC004840.1-201ENST00000636359 365 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AL358472.5-202ENST00000641448 1267 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AF228730.6-201ENST00000641497 218 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC084121.3-201ENST00000641716 218 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AC105233.6-201ENST00000642093 218 ntBASIC16.36■□□□□ 0.21
KDM1BQ8NB78 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDM1BQ8NB78 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 AL596257.1-201ENST00000641463 2694 ntBASIC16.35■□□□□ 0.21
KDM1BQ8NB78 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 AC135586.1-201ENST00000539323 574 ntBASIC16.35■□□□□ 0.21
KDM1BQ8NB78 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 AL691432.1-201ENST00000596308 1422 ntBASIC16.35■□□□□ 0.21
KDM1BQ8NB78 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.35■□□□□ 0.21
KDM1BQ8NB78 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 AC243562.2-201ENST00000561247 970 ntBASIC16.34■□□□□ 0.21
KDM1BQ8NB78 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.34■□□□□ 0.21
KDM1BQ8NB78 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.34■□□□□ 0.21
KDM1BQ8NB78 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.34■□□□□ 0.21
KDM1BQ8NB78 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.34■□□□□ 0.21
KDM1BQ8NB78 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms