Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 AC098859.1-201ENST00000502915 1238 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 POLD2P1-201ENST00000511220 997 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 AC027307.2-201ENST00000591252 911 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 AC073389.1-201ENST00000595595 795 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 SPTSSB-204ENST00000617024 1292 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 RN7SL589P-201ENST00000481268 310 ntBASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AC008267.7-201ENST00000624570 1194 ntBASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AC092902.6-201ENST00000641783 218 ntBASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 AC007326.2-201ENST00000624224 7579 ntBASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
DNAAF3Q8N9W5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DNAAF3Q8N9W5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms