Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 AC055717.3-201ENST00000622967 595 ntBASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC116Q8IYX3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AC105917.1-201ENST00000506637 2539 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AP001282.1-201ENST00000531301 1499 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AL627223.1-201ENST00000416693 442 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 KRT18P32-201ENST00000424695 1287 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AP000344.2-201ENST00000512987 629 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AC093520.2-201ENST00000561830 333 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AC004835.2-201ENST00000603762 682 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 AL691432.1-201ENST00000596308 1422 ntBASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC116Q8IYX3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms