Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 AL158212.4-201ENST00000624062 1286 ntBASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC60Q8IWA6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 PCDHB19P-201ENST00000570871 2371 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC069224.1-201ENST00000566372 1715 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC011477.6-201ENST00000604980 1927 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC099398.1-201ENST00000567919 2776 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC123567.1-201ENST00000548294 1261 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AL118508.1-201ENST00000613502 2345 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC138969.3-201ENST00000546612 1459 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC138932.2-201ENST00000548268 1459 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AC126755.4-201ENST00000549796 1459 ntBASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC60Q8IWA6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AL607033.1-201ENST00000623900 1599 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 MYCLP2-201ENST00000449268 967 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 ELK1P1-201ENST00000485699 580 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 RARRES2P5-201ENST00000564013 466 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AC093726.1-201ENST00000608064 963 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 MIR8072-201ENST00000614241 80 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AC018695.7-201ENST00000624587 2492 ntBASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC60Q8IWA6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC60Q8IWA6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC60Q8IWA6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC60Q8IWA6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC60Q8IWA6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms