Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 CYP46A4P-201ENST00000414953 267 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC093433.1-201ENST00000458048 571 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 RN7SL181P-201ENST00000462921 277 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 GAPDHP40-201ENST00000505218 1006 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AP003419.4-201ENST00000616071 517 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SNX21-203ENST00000372541 771 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC069218.1-201ENST00000435269 762 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 MBP-227ENST00000526111 581 ntTSL 4 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC023310.1-201ENST00000554836 735 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 KRT18P43-201ENST00000469825 1281 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 RPSAP36-202ENST00000494591 1261 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 AP003171.2-201ENST00000528208 925 ntBASIC10.94□□□□□ -0.66
CSMD3Q7Z407 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CSMD3Q7Z407 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 NUP210P1-202ENST00000504322 710 ntBASIC10.93□□□□□ -0.66
CSMD3Q7Z407 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 SLED1-202ENST00000512051 380 ntBASIC10.93□□□□□ -0.66
CSMD3Q7Z407 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 AC107373.2-201ENST00000607735 490 ntBASIC10.93□□□□□ -0.66
CSMD3Q7Z407 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC10.93□□□□□ -0.66
CSMD3Q7Z407 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms