Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT28Q7Z3Y7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
KRT28Q7Z3Y7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT28Q7Z3Y7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT28Q7Z3Y7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 HINT2P1-201ENST00000419438 481 ntBASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 MIR4722-201ENST00000578292 60 ntBASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT28Q7Z3Y7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 AL138799.1-201ENST00000448213 1675 ntBASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 MPRIPP1-201ENST00000452433 1089 ntBASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT28Q7Z3Y7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 KRT8P19-201ENST00000551916 1455 ntBASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 AL133267.1-201ENST00000398220 340 ntBASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 RN7SL769P-201ENST00000469386 295 ntBASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 MIR4706-201ENST00000582134 82 ntBASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 AC138627.1-207ENST00000641560 1006 ntBASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT28Q7Z3Y7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms