Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 AC106881.1-201ENST00000605849 3329 ntBASIC14.56□□□□□ -0.08
SHFQ7M4L6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 TMBIM7P-203ENST00000641617 1718 ntBASIC14.56□□□□□ -0.08
SHFQ7M4L6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 PRSS29P-201ENST00000440800 595 ntBASIC14.56□□□□□ -0.08
SHFQ7M4L6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 MIR3909-201ENST00000579518 119 ntBASIC14.56□□□□□ -0.08
SHFQ7M4L6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 AC004790.2-201ENST00000623588 572 ntBASIC14.56□□□□□ -0.08
SHFQ7M4L6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 AP002414.3-201ENST00000589352 1468 ntBASIC14.56□□□□□ -0.08
SHFQ7M4L6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHFQ7M4L6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
SHFQ7M4L6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AC087481.3-201ENST00000602886 1894 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AL009178.2-201ENST00000597278 2719 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 CICP24-201ENST00000605464 2705 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 PMS2P4-201ENST00000412466 1052 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 CXCL1P1-201ENST00000502804 216 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AL645728.2-201ENST00000641974 660 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 SNX18-202ENST00000343017 3140 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AC091951.1-201ENST00000512854 2465 ntBASIC14.55□□□□□ -0.08
SHFQ7M4L6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms