Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 AP005018.1-201ENST00000525475 301 ntBASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 API5-211ENST00000534695 560 ntTSL 5 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 AL391825.1-201ENST00000457671 1364 ntBASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
H3F3CQ6NXT2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.83□□□□□ -0.03
H3F3CQ6NXT2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.83□□□□□ -0.03
H3F3CQ6NXT2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 AC243562.2-201ENST00000561247 970 ntBASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 AC004461.2-201ENST00000629517 803 ntBASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 AC063926.2-201ENST00000623766 1308 ntBASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.83□□□□□ -0.04
H3F3CQ6NXT2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC007541.1-201ENST00000570282 1469 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 DFFBP1-201ENST00000433250 979 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 DOC2GP-202ENST00000514950 1163 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CR383656.12-201ENST00000549567 513 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms