Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 DGCR5-201ENST00000399539 862 ntBASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 AL035252.4-201ENST00000624174 288 ntBASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 AL358472.5-202ENST00000641448 1267 ntBASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.78■□□□□ 0.44
SWSAP1Q6NVH7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 MEP1AP4-201ENST00000423244 1087 ntBASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 RPL13P2-201ENST00000440687 659 ntBASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC055876.2-201ENST00000531834 546 ntBASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC239800.4-201ENST00000603712 296 ntBASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AC008494.3-201ENST00000606615 944 ntBASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.77■□□□□ 0.44
SWSAP1Q6NVH7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.77■□□□□ 0.43
SWSAP1Q6NVH7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms