Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 PI4KAP1-204ENST00000612579 1703 ntBASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AC013726.1-201ENST00000563747 2285 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AGAP7P-201ENST00000582299 2062 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AGAP14-201ENST00000624701 2060 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AL450487.1-201ENST00000426799 995 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 KRT126P-201ENST00000549467 1181 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AL160237.2-201ENST00000556165 472 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AC011477.6-201ENST00000604980 1927 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AP005117.1-201ENST00000584346 1413 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 AC104581.4-201ENST00000623126 3052 ntBASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
ANKRD55Q3KP44 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 AL390755.1-201ENST00000623716 2027 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PTCHD3P3-201ENST00000403073 906 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 HCG4-201ENST00000418983 998 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 AC026396.1-201ENST00000419388 421 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TPM4P1-201ENST00000436100 807 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms