Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 AC004967.1-201ENST00000453589 447 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 DUX4L17-201ENST00000557360 1267 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 AL691403.2-201ENST00000618460 490 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 ELL2P1-201ENST00000413990 1906 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AP002472.1-201ENST00000577490 586 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AL078644.1-201ENST00000609881 752 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AC091812.2-201ENST00000619081 385 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AL161645.1-201ENST00000622716 1255 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AL139011.1-202ENST00000642063 584 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AC131009.4-201ENST00000624048 1740 ntBASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF3Q3KNV8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 CEND1P1-201ENST00000451006 455 ntBASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 FAM86C2P-203ENST00000528684 1004 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms