Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC009486.1-201ENST00000569860 813 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 MIR6787-201ENST00000616675 61 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 AL607033.1-201ENST00000623900 1599 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 ALOX12P2-203ENST00000570921 1945 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AC106760.1-201ENST00000508690 800 ntBASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 AL139384.1-201ENST00000612143 3047 ntBASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM71Q2Q1W2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM71Q2Q1W2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AL355864.2-201ENST00000447420 863 ntBASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AP001063.1-201ENST00000568332 529 ntBASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 AC244669.2-201ENST00000612320 853 ntBASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms