Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B3Q16720 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2B3Q16720 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B3Q16720 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2B3Q16720 SRD5A3P1-201ENST00000603021 949 ntBASIC19.63■□□□□ 0.73
ATP2B3Q16720 AC074044.1-201ENST00000609673 707 ntBASIC19.63■□□□□ 0.73
ATP2B3Q16720 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B3Q16720 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2B3Q16720 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B3Q16720 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B3Q16720 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B3Q16720 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
ATP2B3Q16720 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 AL136379.1-201ENST00000623471 2642 ntBASIC19.62■□□□□ 0.73
ATP2B3Q16720 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 AP005018.1-201ENST00000525475 301 ntBASIC19.62■□□□□ 0.73
ATP2B3Q16720 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.62■□□□□ 0.73
ATP2B3Q16720 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
ATP2B3Q16720 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B3Q16720 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 API5-211ENST00000534695 560 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2B3Q16720 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATP2B3Q16720 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 MIR648-201ENST00000385046 94 ntBASIC19.6■□□□□ 0.73
ATP2B3Q16720 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 AC025048.6-201ENST00000634326 1161 ntBASIC19.6■□□□□ 0.73
ATP2B3Q16720 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms