Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 HAUS4P1-201ENST00000406739 1145 ntBASIC13.6□□□□□ -0.23
COL10A1Q03692 MIR1233-2-201ENST00000408138 82 ntBASIC13.6□□□□□ -0.23
COL10A1Q03692 MIR1233-1-201ENST00000408722 82 ntBASIC13.6□□□□□ -0.23
COL10A1Q03692 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.6□□□□□ -0.23
COL10A1Q03692 SPCS2P4-201ENST00000436160 681 ntBASIC13.6□□□□□ -0.23
COL10A1Q03692 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.6□□□□□ -0.23
COL10A1Q03692 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.6□□□□□ -0.23
COL10A1Q03692 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.6□□□□□ -0.23
COL10A1Q03692 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.6□□□□□ -0.23
COL10A1Q03692 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.6□□□□□ -0.23
COL10A1Q03692 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.6□□□□□ -0.23
COL10A1Q03692 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.6□□□□□ -0.23
COL10A1Q03692 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.6□□□□□ -0.23
COL10A1Q03692 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COL10A1Q03692 AC144831.1-201ENST00000573312 2656 ntBASIC13.6□□□□□ -0.23
COL10A1Q03692 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 ELL2P1-201ENST00000413990 1906 ntBASIC13.6□□□□□ -0.23
COL10A1Q03692 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COL10A1Q03692 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
COL10A1Q03692 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.6□□□□□ -0.23
COL10A1Q03692 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL10A1Q03692 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AC069224.1-201ENST00000566372 1715 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.59□□□□□ -0.23
COL10A1Q03692 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 BX842568.4-201ENST00000421222 227 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.59□□□□□ -0.23
COL10A1Q03692 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 HMGN1P19-201ENST00000436976 333 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.59□□□□□ -0.23
COL10A1Q03692 MIR3687-2-201ENST00000577708 61 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 MIR4321-201ENST00000592276 80 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 MIR3687-1-201ENST00000614492 61 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
COL10A1Q03692 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
COL10A1Q03692 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COL10A1Q03692 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
COL10A1Q03692 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL10A1Q03692 FOXO1B-201ENST00000504678 1527 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 UXT-AS1-201ENST00000590504 1525 ntBASIC13.59□□□□□ -0.23
COL10A1Q03692 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms