Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BACE1P56817 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.31■□□□□ 0.52
BACE1P56817 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.31■□□□□ 0.52
BACE1P56817 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BACE1P56817 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.31■□□□□ 0.52
BACE1P56817 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.31■□□□□ 0.52
BACE1P56817 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.31■□□□□ 0.52
BACE1P56817 RN7SL219P-201ENST00000582872 296 ntBASIC18.31■□□□□ 0.52
BACE1P56817 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.31■□□□□ 0.52
BACE1P56817 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.31■□□□□ 0.52
BACE1P56817 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BACE1P56817 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.31■□□□□ 0.52
BACE1P56817 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.31■□□□□ 0.52
BACE1P56817 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BACE1P56817 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.31■□□□□ 0.52
BACE1P56817 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.31■□□□□ 0.52
BACE1P56817 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BACE1P56817 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.31■□□□□ 0.52
BACE1P56817 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BACE1P56817 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BACE1P56817 AGGF1P2-201ENST00000426656 2106 ntBASIC18.31■□□□□ 0.52
BACE1P56817 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BACE1P56817 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BACE1P56817 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.3■□□□□ 0.52
BACE1P56817 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 AC018892.3-201ENST00000623986 2499 ntBASIC18.3■□□□□ 0.52
BACE1P56817 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.3■□□□□ 0.52
BACE1P56817 FAM21FP-201ENST00000426241 1131 ntBASIC18.3■□□□□ 0.52
BACE1P56817 AC016694.1-201ENST00000434179 700 ntBASIC18.3■□□□□ 0.52
BACE1P56817 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.3■□□□□ 0.52
BACE1P56817 AC106760.1-201ENST00000508690 800 ntBASIC18.3■□□□□ 0.52
BACE1P56817 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BACE1P56817 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.3■□□□□ 0.52
BACE1P56817 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.3■□□□□ 0.52
BACE1P56817 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BACE1P56817 AC011676.5-201ENST00000624864 2660 ntBASIC18.3■□□□□ 0.52
BACE1P56817 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 DRD5P1-201ENST00000456605 1438 ntBASIC18.3■□□□□ 0.52
BACE1P56817 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BACE1P56817 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BACE1P56817 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
BACE1P56817 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.29■□□□□ 0.52
BACE1P56817 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 ACKR1-201ENST00000368121 1240 ntBASIC18.29■□□□□ 0.52
BACE1P56817 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.29■□□□□ 0.52
BACE1P56817 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.29■□□□□ 0.52
BACE1P56817 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.29■□□□□ 0.52
BACE1P56817 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.29■□□□□ 0.52
BACE1P56817 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BACE1P56817 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms