Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLDN6P56747 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.34■□□□□ 0.05
CLDN6P56747 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 AL162726.2-201ENST00000438986 1017 ntBASIC15.34■□□□□ 0.05
CLDN6P56747 AC007551.1-201ENST00000457394 519 ntBASIC15.34■□□□□ 0.05
CLDN6P56747 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.34■□□□□ 0.05
CLDN6P56747 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.34■□□□□ 0.05
CLDN6P56747 AL022328.1-201ENST00000610050 478 ntBASIC15.34■□□□□ 0.05
CLDN6P56747 AC009542.2-202ENST00000619004 1067 ntBASIC15.34■□□□□ 0.05
CLDN6P56747 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLDN6P56747 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CLDN6P56747 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CLDN6P56747 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.33■□□□□ 0.05
CLDN6P56747 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN6P56747 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLDN6P56747 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 AC074338.1-201ENST00000416825 156 ntBASIC15.33■□□□□ 0.04
CLDN6P56747 ACTG1P3-201ENST00000431775 1114 ntBASIC15.33■□□□□ 0.04
CLDN6P56747 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDN6P56747 ZNF767P-206ENST00000513792 565 ntBASIC15.33■□□□□ 0.04
CLDN6P56747 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDN6P56747 AC243960.2-201ENST00000600996 747 ntBASIC15.33■□□□□ 0.04
CLDN6P56747 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.33■□□□□ 0.04
CLDN6P56747 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLDN6P56747 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDN6P56747 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CLDN6P56747 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN6P56747 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDN6P56747 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDN6P56747 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 NKILA-202ENST00000614771 2598 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN6P56747 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN6P56747 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN6P56747 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms