Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 AC007541.1-201ENST00000570282 1469 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 AC015922.1-201ENST00000421102 1152 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 AL353779.1-201ENST00000434793 351 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 AL589987.1-201ENST00000453380 819 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.31□□□□□ -0.12
GFRA1P56159 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.31□□□□□ -0.12
GFRA1P56159 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 TIMM17BP1-201ENST00000545713 516 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.31□□□□□ -0.12
GFRA1P56159 AC097359.3-201ENST00000603982 1210 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 LINC01115-203ENST00000606068 577 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.31□□□□□ -0.12
GFRA1P56159 CDC14C-201ENST00000428251 1719 ntBASIC14.31□□□□□ -0.12
GFRA1P56159 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
GFRA1P56159 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GFRA1P56159 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GFRA1P56159 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GFRA1P56159 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 LINC02447-202ENST00000501888 2146 ntBASIC14.3□□□□□ -0.12
GFRA1P56159 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.3□□□□□ -0.12
GFRA1P56159 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GFRA1P56159 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 AC018892.3-201ENST00000623986 2499 ntBASIC14.3□□□□□ -0.12
GFRA1P56159 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.3□□□□□ -0.12
GFRA1P56159 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.3□□□□□ -0.12
GFRA1P56159 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.3□□□□□ -0.12
GFRA1P56159 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms