Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB4P54760 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 AP005482.1-201ENST00000563722 1273 ntBASIC18.04■□□□□ 0.48
EPHB4P54760 MIR4492-201ENST00000581627 80 ntBASIC18.04■□□□□ 0.48
EPHB4P54760 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
EPHB4P54760 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB4P54760 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EPHB4P54760 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB4P54760 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.03■□□□□ 0.48
EPHB4P54760 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
EPHB4P54760 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EPHB4P54760 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHB4P54760 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHB4P54760 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EPHB4P54760 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
EPHB4P54760 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHB4P54760 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
EPHB4P54760 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EPHB4P54760 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 AC114501.2-201ENST00000439631 535 ntBASIC18.03■□□□□ 0.48
EPHB4P54760 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.03■□□□□ 0.48
EPHB4P54760 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
EPHB4P54760 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
EPHB4P54760 AC055876.2-201ENST00000531834 546 ntBASIC18.03■□□□□ 0.48
EPHB4P54760 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 AC133552.6-201ENST00000613406 534 ntBASIC18.03■□□□□ 0.48
EPHB4P54760 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.03■□□□□ 0.48
EPHB4P54760 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EPHB4P54760 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHB4P54760 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHB4P54760 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHB4P54760 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHB4P54760 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 AC073439.1-201ENST00000624121 1774 ntBASIC18.02■□□□□ 0.48
EPHB4P54760 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.02■□□□□ 0.48
EPHB4P54760 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
EPHB4P54760 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHB4P54760 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.02■□□□□ 0.48
EPHB4P54760 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHB4P54760 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHB4P54760 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.02■□□□□ 0.48
EPHB4P54760 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 AC023310.3-201ENST00000557027 670 ntBASIC18.02■□□□□ 0.48
EPHB4P54760 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHB4P54760 AC100756.1-201ENST00000562736 682 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms