Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB3P54753 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB3P54753 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB3P54753 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB3P54753 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB3P54753 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EPHB3P54753 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHB3P54753 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.67■□□□□ 0.26
EPHB3P54753 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHB3P54753 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
EPHB3P54753 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
EPHB3P54753 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
EPHB3P54753 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EPHB3P54753 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EPHB3P54753 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
EPHB3P54753 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 ACA64.2-201ENST00000459014 129 ntBASIC16.66■□□□□ 0.26
EPHB3P54753 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.66■□□□□ 0.26
EPHB3P54753 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EPHB3P54753 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
EPHB3P54753 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
EPHB3P54753 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EPHB3P54753 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB3P54753 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB3P54753 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 TOMM22P5-201ENST00000416399 439 ntBASIC16.65■□□□□ 0.26
EPHB3P54753 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 AC112492.5-201ENST00000421897 457 ntBASIC16.65■□□□□ 0.26
EPHB3P54753 AL442647.2-201ENST00000429864 857 ntBASIC16.65■□□□□ 0.26
EPHB3P54753 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHB3P54753 FAM86LP-201ENST00000478302 853 ntBASIC16.65■□□□□ 0.26
EPHB3P54753 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHB3P54753 SLED1-202ENST00000512051 380 ntBASIC16.65■□□□□ 0.26
EPHB3P54753 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.65■□□□□ 0.26
EPHB3P54753 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
EPHB3P54753 AC133539.2-201ENST00000604757 467 ntBASIC16.65■□□□□ 0.26
EPHB3P54753 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
EPHB3P54753 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB3P54753 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHB3P54753 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
EPHB3P54753 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.64■□□□□ 0.26
EPHB3P54753 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB3P54753 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 NFIC-211ENST00000641145 8399 ntBASIC16.64■□□□□ 0.25
EPHB3P54753 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.64■□□□□ 0.25
EPHB3P54753 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
EPHB3P54753 MIR648-201ENST00000385046 94 ntBASIC16.64■□□□□ 0.25
EPHB3P54753 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms