Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 CDC14C-201ENST00000428251 1719 ntBASIC16.91■□□□□ 0.3
LHX1P48742 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 PCDHB19P-201ENST00000570871 2371 ntBASIC16.91■□□□□ 0.3
LHX1P48742 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 AC087499.6-201ENST00000411576 835 ntBASIC16.91■□□□□ 0.3
LHX1P48742 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.91■□□□□ 0.3
LHX1P48742 RPL13P2-201ENST00000440687 659 ntBASIC16.91■□□□□ 0.3
LHX1P48742 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.91■□□□□ 0.3
LHX1P48742 MEIS3P1-201ENST00000495167 958 ntBASIC16.91■□□□□ 0.3
LHX1P48742 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 TPRX2P-201ENST00000535362 881 ntBASIC16.91■□□□□ 0.3
LHX1P48742 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
LHX1P48742 HNRNPUP1-201ENST00000554987 333 ntBASIC16.91■□□□□ 0.3
LHX1P48742 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LHX1P48742 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
LHX1P48742 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
LHX1P48742 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX1P48742 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LHX1P48742 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX1P48742 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX1P48742 LINC02447-202ENST00000501888 2146 ntBASIC16.9■□□□□ 0.3
LHX1P48742 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX1P48742 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LHX1P48742 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX1P48742 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX1P48742 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX1P48742 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX1P48742 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
LHX1P48742 SPDYE22P-201ENST00000582158 798 ntBASIC16.9■□□□□ 0.3
LHX1P48742 AL662799.1-202ENST00000614205 422 ntBASIC16.9■□□□□ 0.3
LHX1P48742 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
LHX1P48742 AC124067.4-201ENST00000519691 2379 ntBASIC16.9■□□□□ 0.3
LHX1P48742 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LHX1P48742 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.9■□□□□ 0.3
LHX1P48742 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX1P48742 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX1P48742 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LHX1P48742 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.89■□□□□ 0.3
LHX1P48742 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.89■□□□□ 0.3
LHX1P48742 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LHX1P48742 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX1P48742 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
LHX1P48742 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX1P48742 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX1P48742 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX1P48742 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
LHX1P48742 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX1P48742 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX1P48742 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX1P48742 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX1P48742 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LHX1P48742 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms