Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF4P48230 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF4P48230 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.92■□□□□ 0.46
TM4SF4P48230 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.92■□□□□ 0.46
TM4SF4P48230 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.92■□□□□ 0.46
TM4SF4P48230 AC148477.4-201ENST00000613430 1793 ntBASIC17.92■□□□□ 0.46
TM4SF4P48230 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 AC234782.1-201ENST00000451950 919 ntBASIC17.92■□□□□ 0.46
TM4SF4P48230 RN7SL818P-201ENST00000485099 259 ntBASIC17.92■□□□□ 0.46
TM4SF4P48230 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
TM4SF4P48230 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.92■□□□□ 0.46
TM4SF4P48230 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 RN7SL725P-201ENST00000606439 259 ntBASIC17.92■□□□□ 0.46
TM4SF4P48230 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.92■□□□□ 0.46
TM4SF4P48230 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
TM4SF4P48230 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TM4SF4P48230 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF4P48230 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF4P48230 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TM4SF4P48230 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF4P48230 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TM4SF4P48230 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TM4SF4P48230 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF4P48230 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF4P48230 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF4P48230 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TM4SF4P48230 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.91■□□□□ 0.46
TM4SF4P48230 AL354877.1-201ENST00000424412 413 ntBASIC17.91■□□□□ 0.46
TM4SF4P48230 AC011742.3-201ENST00000439053 820 ntBASIC17.91■□□□□ 0.46
TM4SF4P48230 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.91■□□□□ 0.46
TM4SF4P48230 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF4P48230 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 RN7SL713P-201ENST00000582127 302 ntBASIC17.91■□□□□ 0.46
TM4SF4P48230 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.91■□□□□ 0.46
TM4SF4P48230 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 AL023803.2-201ENST00000620080 638 ntBASIC17.91■□□□□ 0.46
TM4SF4P48230 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF4P48230 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
TM4SF4P48230 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF4P48230 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 PP12613-201ENST00000424958 2230 ntBASIC17.91■□□□□ 0.46
TM4SF4P48230 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF4P48230 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.9■□□□□ 0.46
TM4SF4P48230 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
TM4SF4P48230 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
TM4SF4P48230 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF4P48230 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.9■□□□□ 0.46
TM4SF4P48230 ACTG1P2-201ENST00000415776 1125 ntBASIC17.9■□□□□ 0.46
TM4SF4P48230 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 ACTG1P11-201ENST00000425411 1125 ntBASIC17.9■□□□□ 0.46
TM4SF4P48230 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.9■□□□□ 0.46
TM4SF4P48230 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.9■□□□□ 0.46
TM4SF4P48230 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms