Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NEDD4P46934 PHKG1P2-201ENST00000457537 863 ntBASIC18.81■□□□□ 0.6
NEDD4P46934 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.81■□□□□ 0.6
NEDD4P46934 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.81■□□□□ 0.6
NEDD4P46934 AL096865.1-201ENST00000606796 927 ntBASIC18.81■□□□□ 0.6
NEDD4P46934 MIR6069-201ENST00000620069 79 ntBASIC18.81■□□□□ 0.6
NEDD4P46934 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.81■□□□□ 0.6
NEDD4P46934 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.81■□□□□ 0.6
NEDD4P46934 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 TARDBPP1-201ENST00000442013 1203 ntBASIC18.8■□□□□ 0.6
NEDD4P46934 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.8■□□□□ 0.6
NEDD4P46934 INGX-202ENST00000489074 768 ntBASIC18.8■□□□□ 0.6
NEDD4P46934 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.8■□□□□ 0.6
NEDD4P46934 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.8■□□□□ 0.6
NEDD4P46934 AC011467.4-201ENST00000594891 528 ntBASIC18.8■□□□□ 0.6
NEDD4P46934 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.8■□□□□ 0.6
NEDD4P46934 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.8■□□□□ 0.6
NEDD4P46934 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.8■□□□□ 0.6
NEDD4P46934 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4P46934 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4P46934 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NEDD4P46934 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NEDD4P46934 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD4P46934 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 AC136604.1-201ENST00000418535 575 ntBASIC18.79■□□□□ 0.6
NEDD4P46934 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD4P46934 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD4P46934 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.79■□□□□ 0.6
NEDD4P46934 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD4P46934 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.79■□□□□ 0.6
NEDD4P46934 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.79■□□□□ 0.6
NEDD4P46934 MIR4313-201ENST00000580760 101 ntBASIC18.79■□□□□ 0.6
NEDD4P46934 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4P46934 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.79■□□□□ 0.6
NEDD4P46934 LINC01115-203ENST00000606068 577 ntBASIC18.79■□□□□ 0.6
NEDD4P46934 AJ011932.1-201ENST00000621707 465 ntBASIC18.79■□□□□ 0.6
NEDD4P46934 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD4P46934 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms