Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 AL161772.1-201ENST00000610494 4412 ntBASIC15.34■□□□□ 0.05
KRT20P35900 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT20P35900 AL512652.2-201ENST00000625156 1716 ntBASIC15.34■□□□□ 0.05
KRT20P35900 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT20P35900 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT20P35900 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.33■□□□□ 0.05
KRT20P35900 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT20P35900 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT20P35900 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 BX842568.4-201ENST00000421222 227 ntBASIC15.33■□□□□ 0.04
KRT20P35900 MCCD1P2-201ENST00000423228 335 ntBASIC15.33■□□□□ 0.04
KRT20P35900 FAM58CP-201ENST00000435741 640 ntBASIC15.33■□□□□ 0.04
KRT20P35900 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT20P35900 KRT18P34-201ENST00000488218 1270 ntBASIC15.33■□□□□ 0.04
KRT20P35900 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
KRT20P35900 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT20P35900 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
KRT20P35900 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.33■□□□□ 0.04
KRT20P35900 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 AL671883.3-201ENST00000603274 991 ntBASIC15.33■□□□□ 0.04
KRT20P35900 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 GPAA1P2-202ENST00000606848 1787 ntBASIC15.33■□□□□ 0.04
KRT20P35900 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT20P35900 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT20P35900 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT20P35900 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT20P35900 AL031731.1-201ENST00000642131 2094 ntBASIC15.32■□□□□ 0.04
KRT20P35900 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KRT20P35900 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT20P35900 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KRT20P35900 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
KRT20P35900 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.32■□□□□ 0.04
KRT20P35900 AC091812.2-201ENST00000619081 385 ntBASIC15.32■□□□□ 0.04
KRT20P35900 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT20P35900 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms