Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPA3P35244 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPA3P35244 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPA3P35244 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.27■□□□□ 0.2
RPA3P35244 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.27■□□□□ 0.2
RPA3P35244 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RPA3P35244 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.27■□□□□ 0.2
RPA3P35244 AC106881.1-201ENST00000605849 3329 ntBASIC16.27■□□□□ 0.2
RPA3P35244 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RPA3P35244 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RPA3P35244 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.27■□□□□ 0.2
RPA3P35244 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RPA3P35244 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPA3P35244 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.27■□□□□ 0.2
RPA3P35244 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.27■□□□□ 0.2
RPA3P35244 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.27■□□□□ 0.2
RPA3P35244 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.27■□□□□ 0.2
RPA3P35244 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 AC023141.13-201ENST00000604991 943 ntBASIC16.27■□□□□ 0.2
RPA3P35244 AC012569.1-201ENST00000591191 1524 ntBASIC16.27■□□□□ 0.2
RPA3P35244 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPA3P35244 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.27■□□□□ 0.19
RPA3P35244 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.27■□□□□ 0.19
RPA3P35244 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RPA3P35244 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPA3P35244 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.27■□□□□ 0.19
RPA3P35244 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
RPA3P35244 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
RPA3P35244 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.26■□□□□ 0.19
RPA3P35244 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 BCAR1-209ENST00000546196 1340 ntBASIC16.26■□□□□ 0.19
RPA3P35244 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
RPA3P35244 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 MIR574-201ENST00000385209 96 ntBASIC16.26■□□□□ 0.19
RPA3P35244 KRT18P2-201ENST00000447938 1258 ntBASIC16.26■□□□□ 0.19
RPA3P35244 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.26■□□□□ 0.19
RPA3P35244 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.26■□□□□ 0.19
RPA3P35244 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.26■□□□□ 0.19
RPA3P35244 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.26■□□□□ 0.19
RPA3P35244 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.26■□□□□ 0.19
RPA3P35244 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPA3P35244 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.26■□□□□ 0.19
RPA3P35244 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RPA3P35244 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPA3P35244 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.26■□□□□ 0.19
RPA3P35244 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.26■□□□□ 0.19
RPA3P35244 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RPA3P35244 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPA3P35244 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RPA3P35244 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RPA3P35244 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.25■□□□□ 0.19
RPA3P35244 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RPA3P35244 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RPA3P35244 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
RPA3P35244 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RPA3P35244 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPA3P35244 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.25■□□□□ 0.19
RPA3P35244 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.25■□□□□ 0.19
RPA3P35244 AP000347.1-202ENST00000435868 847 ntBASIC16.25■□□□□ 0.19
RPA3P35244 RHOQP3-201ENST00000437982 621 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms