Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA10P31260 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 MIR648-201ENST00000385046 94 ntBASIC19.28■□□□□ 0.68
HOXA10P31260 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.28■□□□□ 0.68
HOXA10P31260 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 BTBD6P1-201ENST00000412176 1267 ntBASIC19.28■□□□□ 0.68
HOXA10P31260 AC007969.1-201ENST00000433675 447 ntBASIC19.28■□□□□ 0.68
HOXA10P31260 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA10P31260 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA10P31260 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA10P31260 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.28■□□□□ 0.68
HOXA10P31260 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA10P31260 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA10P31260 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HOXA10P31260 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
HOXA10P31260 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA10P31260 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA10P31260 AC092171.3-201ENST00000610122 2651 ntBASIC19.28■□□□□ 0.68
HOXA10P31260 AC106820.2-201ENST00000563775 3264 ntBASIC19.27■□□□□ 0.68
HOXA10P31260 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA10P31260 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 KRT8P35-201ENST00000483942 1338 ntBASIC19.27■□□□□ 0.68
HOXA10P31260 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
HOXA10P31260 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA10P31260 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HOXA10P31260 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA10P31260 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.27■□□□□ 0.68
HOXA10P31260 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXA10P31260 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA10P31260 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA10P31260 RHOQP1-201ENST00000555758 579 ntBASIC19.27■□□□□ 0.68
HOXA10P31260 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.27■□□□□ 0.68
HOXA10P31260 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA10P31260 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.27■□□□□ 0.68
HOXA10P31260 AC005695.3-201ENST00000614522 232 ntBASIC19.27■□□□□ 0.68
HOXA10P31260 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA10P31260 AC006449.6-201ENST00000612330 2296 ntBASIC19.27■□□□□ 0.68
HOXA10P31260 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA10P31260 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA10P31260 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA10P31260 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA10P31260 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
HOXA10P31260 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA10P31260 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXA10P31260 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA10P31260 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXA10P31260 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA10P31260 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXA10P31260 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA10P31260 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA10P31260 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXA10P31260 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA10P31260 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 AC004898.1-201ENST00000451057 766 ntBASIC19.26■□□□□ 0.67
HOXA10P31260 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA10P31260 RPSAP36-202ENST00000494591 1261 ntBASIC19.26■□□□□ 0.67
HOXA10P31260 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA10P31260 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXA10P31260 MIR4741-201ENST00000579822 90 ntBASIC19.26■□□□□ 0.67
HOXA10P31260 MIR4313-201ENST00000580760 101 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms