Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 HLA-A-202ENST00000376806 1854 ntBASIC19.42■□□□□ 0.7
CHRNA5P30532 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 MIR33B-201ENST00000385104 96 ntBASIC19.42■□□□□ 0.7
CHRNA5P30532 AC104457.1-201ENST00000401024 814 ntBASIC19.42■□□□□ 0.7
CHRNA5P30532 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRNA5P30532 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA5P30532 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA5P30532 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.42■□□□□ 0.7
CHRNA5P30532 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHRNA5P30532 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA5P30532 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA5P30532 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA5P30532 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA5P30532 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA5P30532 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA5P30532 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA5P30532 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA5P30532 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 TMEM198B-204ENST00000484016 896 ntBASIC19.41■□□□□ 0.7
CHRNA5P30532 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA5P30532 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.41■□□□□ 0.7
CHRNA5P30532 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA5P30532 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA5P30532 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHRNA5P30532 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA5P30532 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.41■□□□□ 0.7
CHRNA5P30532 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA5P30532 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA5P30532 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA5P30532 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA5P30532 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA5P30532 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA5P30532 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA5P30532 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNA5P30532 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNA5P30532 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHRNA5P30532 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA5P30532 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.4■□□□□ 0.7
CHRNA5P30532 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRNA5P30532 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.4■□□□□ 0.7
CHRNA5P30532 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA5P30532 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA5P30532 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA5P30532 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNA5P30532 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNA5P30532 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNA5P30532 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA5P30532 HCG11-201ENST00000411553 5696 ntBASIC19.39■□□□□ 0.69
CHRNA5P30532 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms