Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VARSP26640 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.86■□□□□ 0.13
VARSP26640 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARSP26640 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARSP26640 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARSP26640 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARSP26640 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
VARSP26640 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.85■□□□□ 0.13
VARSP26640 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.85■□□□□ 0.13
VARSP26640 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.85■□□□□ 0.13
VARSP26640 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 AC002056.1-201ENST00000395613 760 ntBASIC15.85■□□□□ 0.13
VARSP26640 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
VARSP26640 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.85■□□□□ 0.13
VARSP26640 AC112191.1-201ENST00000523689 701 ntBASIC15.85■□□□□ 0.13
VARSP26640 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.85■□□□□ 0.13
VARSP26640 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VARSP26640 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.85■□□□□ 0.13
VARSP26640 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 AP001002.2-201ENST00000625137 386 ntBASIC15.85■□□□□ 0.13
VARSP26640 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.85■□□□□ 0.13
VARSP26640 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.85■□□□□ 0.13
VARSP26640 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VARSP26640 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
VARSP26640 WASH6P-202ENST00000359512 1437 ntBASIC15.85■□□□□ 0.13
VARSP26640 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARSP26640 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 FAM58CP-201ENST00000435741 640 ntBASIC15.84■□□□□ 0.13
VARSP26640 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.84■□□□□ 0.13
VARSP26640 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 AC004449.1-201ENST00000564240 433 ntBASIC15.84■□□□□ 0.13
VARSP26640 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.84■□□□□ 0.13
VARSP26640 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
VARSP26640 AC106028.4-201ENST00000614509 607 ntBASIC15.84■□□□□ 0.13
VARSP26640 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 AL161645.1-201ENST00000622716 1255 ntBASIC15.84■□□□□ 0.13
VARSP26640 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 AL009178.2-201ENST00000597278 2719 ntBASIC15.84■□□□□ 0.13
VARSP26640 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
VARSP26640 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms