Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC074338.1-201ENST00000416825 156 ntBASIC15.41■□□□□ 0.06
LAMA1P25391 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.41■□□□□ 0.06
LAMA1P25391 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.41■□□□□ 0.06
LAMA1P25391 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.41■□□□□ 0.06
LAMA1P25391 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.41■□□□□ 0.06
LAMA1P25391 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.41■□□□□ 0.06
LAMA1P25391 AC145423.3-201ENST00000615987 467 ntBASIC15.41■□□□□ 0.06
LAMA1P25391 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LAMA1P25391 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.41■□□□□ 0.06
LAMA1P25391 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.41■□□□□ 0.06
LAMA1P25391 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LAMA1P25391 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 ME2P1-201ENST00000426028 1970 ntBASIC15.4■□□□□ 0.06
LAMA1P25391 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LAMA1P25391 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LAMA1P25391 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 AL359258.3-201ENST00000622910 2331 ntBASIC15.4■□□□□ 0.06
LAMA1P25391 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 AC006001.1-201ENST00000325130 474 ntBASIC15.4■□□□□ 0.06
LAMA1P25391 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LAMA1P25391 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 AL121723.1-201ENST00000445194 1519 ntBASIC15.4■□□□□ 0.06
LAMA1P25391 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 AC091046.1-201ENST00000331871 207 ntBASIC15.4■□□□□ 0.06
LAMA1P25391 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.4■□□□□ 0.06
LAMA1P25391 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.4■□□□□ 0.06
LAMA1P25391 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 AC107373.2-201ENST00000607735 490 ntBASIC15.4■□□□□ 0.06
LAMA1P25391 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.4■□□□□ 0.06
LAMA1P25391 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LAMA1P25391 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LAMA1P25391 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.39■□□□□ 0.05
LAMA1P25391 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LAMA1P25391 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LAMA1P25391 SLC25A24P2-201ENST00000415059 510 ntBASIC15.39■□□□□ 0.05
LAMA1P25391 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LAMA1P25391 KRT18P43-201ENST00000469825 1281 ntBASIC15.39■□□□□ 0.05
LAMA1P25391 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.39■□□□□ 0.05
LAMA1P25391 HNRNPUP1-201ENST00000554987 333 ntBASIC15.39■□□□□ 0.05
LAMA1P25391 MIR5572-201ENST00000583188 137 ntBASIC15.39■□□□□ 0.05
LAMA1P25391 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.39■□□□□ 0.05
LAMA1P25391 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LAMA1P25391 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LAMA1P25391 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LAMA1P25391 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms