Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
BRAFP15056 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
BRAFP15056 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.57■□□□□ 0.24
BRAFP15056 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.57■□□□□ 0.24
BRAFP15056 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.57■□□□□ 0.24
BRAFP15056 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRAFP15056 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.56■□□□□ 0.24
BRAFP15056 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 AC131009.4-201ENST00000624048 1740 ntBASIC16.56■□□□□ 0.24
BRAFP15056 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.56■□□□□ 0.24
BRAFP15056 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BRAFP15056 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
BRAFP15056 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.56■□□□□ 0.24
BRAFP15056 DNAJB3-201ENST00000446806 729 ntBASIC16.56■□□□□ 0.24
BRAFP15056 AL513480.1-201ENST00000451731 511 ntBASIC16.56■□□□□ 0.24
BRAFP15056 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.56■□□□□ 0.24
BRAFP15056 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
BRAFP15056 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.56■□□□□ 0.24
BRAFP15056 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.56■□□□□ 0.24
BRAFP15056 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 GPALPP1-207ENST00000611650 899 ntBASIC16.56■□□□□ 0.24
BRAFP15056 AC007064.4-201ENST00000637740 555 ntBASIC16.56■□□□□ 0.24
BRAFP15056 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BRAFP15056 FLJ16779-201ENST00000612722 7638 ntBASIC16.56■□□□□ 0.24
BRAFP15056 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BRAFP15056 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
BRAFP15056 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRAFP15056 FAM45BP-202ENST00000592932 1624 ntBASIC16.56■□□□□ 0.24
BRAFP15056 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.55■□□□□ 0.24
BRAFP15056 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
BRAFP15056 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
BRAFP15056 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.55■□□□□ 0.24
BRAFP15056 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
BRAFP15056 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BRAFP15056 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.55■□□□□ 0.24
BRAFP15056 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.55■□□□□ 0.24
BRAFP15056 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.55■□□□□ 0.24
BRAFP15056 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.55■□□□□ 0.24
BRAFP15056 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 AC055717.3-201ENST00000622967 595 ntBASIC16.55■□□□□ 0.24
BRAFP15056 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.55■□□□□ 0.24
BRAFP15056 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BRAFP15056 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BRAFP15056 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRAFP15056 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms