Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RARAP10276 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.86■□□□□ 0.29
RARAP10276 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RARAP10276 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RARAP10276 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.86■□□□□ 0.29
RARAP10276 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.86■□□□□ 0.29
RARAP10276 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.86■□□□□ 0.29
RARAP10276 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RARAP10276 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.86■□□□□ 0.29
RARAP10276 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RARAP10276 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 MIR346-201ENST00000362234 95 ntBASIC16.85■□□□□ 0.29
RARAP10276 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 TIMM8BP1-201ENST00000452384 211 ntBASIC16.85■□□□□ 0.29
RARAP10276 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.85■□□□□ 0.29
RARAP10276 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.85■□□□□ 0.29
RARAP10276 AP000842.3-202ENST00000569238 1080 ntBASIC16.85■□□□□ 0.29
RARAP10276 AC061975.2-201ENST00000581722 295 ntBASIC16.85■□□□□ 0.29
RARAP10276 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.85■□□□□ 0.29
RARAP10276 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RARAP10276 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.85■□□□□ 0.29
RARAP10276 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.85■□□□□ 0.29
RARAP10276 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RARAP10276 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.85■□□□□ 0.29
RARAP10276 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RARAP10276 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms