Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 AC044849.1-201ENST00000519737 1188 ntBASIC20.67■□□□□ 0.9
COL5A2P05997 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
COL5A2P05997 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL5A2P05997 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL5A2P05997 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.66■□□□□ 0.9
COL5A2P05997 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL5A2P05997 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
COL5A2P05997 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL5A2P05997 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL5A2P05997 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.66■□□□□ 0.9
COL5A2P05997 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC20.66■□□□□ 0.9
COL5A2P05997 AP003171.2-201ENST00000528208 925 ntBASIC20.66■□□□□ 0.9
COL5A2P05997 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
COL5A2P05997 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.66■□□□□ 0.9
COL5A2P05997 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.66■□□□□ 0.9
COL5A2P05997 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL5A2P05997 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL5A2P05997 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL5A2P05997 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 MIR33B-201ENST00000385104 96 ntBASIC20.65■□□□□ 0.9
COL5A2P05997 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COL5A2P05997 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 CYP46A4P-201ENST00000414953 267 ntBASIC20.65■□□□□ 0.9
COL5A2P05997 MPRIPP1-201ENST00000452433 1089 ntBASIC20.65■□□□□ 0.9
COL5A2P05997 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.65■□□□□ 0.9
COL5A2P05997 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.65■□□□□ 0.9
COL5A2P05997 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.65■□□□□ 0.9
COL5A2P05997 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.65■□□□□ 0.9
COL5A2P05997 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.65■□□□□ 0.9
COL5A2P05997 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.65■□□□□ 0.9
COL5A2P05997 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COL5A2P05997 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.65■□□□□ 0.9
COL5A2P05997 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.65■□□□□ 0.9
COL5A2P05997 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL5A2P05997 ALOX12P2-203ENST00000570921 1945 ntBASIC20.65■□□□□ 0.9
COL5A2P05997 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL5A2P05997 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
COL5A2P05997 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.64■□□□□ 0.9
COL5A2P05997 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.64■□□□□ 0.89
COL5A2P05997 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.64■□□□□ 0.89
COL5A2P05997 NKAIN1P1-201ENST00000435754 582 ntBASIC20.64■□□□□ 0.89
COL5A2P05997 SPTLC1P5-201ENST00000450718 252 ntBASIC20.64■□□□□ 0.89
COL5A2P05997 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.64■□□□□ 0.89
COL5A2P05997 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.64■□□□□ 0.89
COL5A2P05997 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.64■□□□□ 0.89
COL5A2P05997 AC128714.1-201ENST00000637035 887 ntBASIC20.64■□□□□ 0.89
COL5A2P05997 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.64■□□□□ 0.89
COL5A2P05997 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
COL5A2P05997 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL5A2P05997 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL5A2P05997 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL5A2P05997 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.63■□□□□ 0.89
COL5A2P05997 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.63■□□□□ 0.89
COL5A2P05997 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.63■□□□□ 0.89
COL5A2P05997 SERPINA13P-202ENST00000478994 924 ntBASIC20.63■□□□□ 0.89
COL5A2P05997 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 SPCS2P2-201ENST00000603270 608 ntBASIC20.63■□□□□ 0.89
COL5A2P05997 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.63■□□□□ 0.89
COL5A2P05997 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.63■□□□□ 0.89
COL5A2P05997 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms