Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CHGBP05060 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.2■□□□□ 0.66
CHGBP05060 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.2■□□□□ 0.66
CHGBP05060 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 AC092127.1-201ENST00000567093 3455 ntBASIC19.19■□□□□ 0.66
CHGBP05060 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.19■□□□□ 0.66
CHGBP05060 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.19■□□□□ 0.66
CHGBP05060 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CHGBP05060 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 PHKG1P2-201ENST00000457537 863 ntBASIC19.19■□□□□ 0.66
CHGBP05060 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.19■□□□□ 0.66
CHGBP05060 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHGBP05060 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 AC011477.6-201ENST00000604980 1927 ntBASIC19.19■□□□□ 0.66
CHGBP05060 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.19■□□□□ 0.66
CHGBP05060 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHGBP05060 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHGBP05060 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.18■□□□□ 0.66
CHGBP05060 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.18■□□□□ 0.66
CHGBP05060 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.18■□□□□ 0.66
CHGBP05060 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.18■□□□□ 0.66
CHGBP05060 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.18■□□□□ 0.66
CHGBP05060 SPTLC1P1-201ENST00000447199 261 ntBASIC19.18■□□□□ 0.66
CHGBP05060 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.18■□□□□ 0.66
CHGBP05060 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.18■□□□□ 0.66
CHGBP05060 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 AC135586.1-201ENST00000539323 574 ntBASIC19.18■□□□□ 0.66
CHGBP05060 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.18■□□□□ 0.66
CHGBP05060 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.18■□□□□ 0.66
CHGBP05060 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.18■□□□□ 0.66
CHGBP05060 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.18■□□□□ 0.66
CHGBP05060 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.18■□□□□ 0.66
CHGBP05060 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.18■□□□□ 0.66
CHGBP05060 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.18■□□□□ 0.66
CHGBP05060 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.18■□□□□ 0.66
CHGBP05060 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 AC092850.2-201ENST00000623821 2697 ntBASIC19.18■□□□□ 0.66
CHGBP05060 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.18■□□□□ 0.66
CHGBP05060 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
CHGBP05060 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHGBP05060 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHGBP05060 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.17■□□□□ 0.66
CHGBP05060 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHGBP05060 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.17■□□□□ 0.66
CHGBP05060 ZNF890P-202ENST00000530367 1156 ntBASIC19.17■□□□□ 0.66
CHGBP05060 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHGBP05060 AC092364.2-202ENST00000597012 1073 ntBASIC19.17■□□□□ 0.66
CHGBP05060 AC008761.3-201ENST00000624803 892 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms