Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND1P03886 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.21■□□□□ 0.02
MT-ND1P03886 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.02
MT-ND1P03886 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND1P03886 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MT-ND1P03886 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND1P03886 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND1P03886 KRT18P27-201ENST00000427733 1299 ntBASIC15.2■□□□□ 0.02
MT-ND1P03886 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND1P03886 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 RPS15P9-201ENST00000494093 319 ntBASIC15.2■□□□□ 0.02
MT-ND1P03886 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND1P03886 OR7E14P-202ENST00000530490 1290 ntBASIC15.2■□□□□ 0.02
MT-ND1P03886 IFNL4P1-201ENST00000607083 540 ntBASIC15.2■□□□□ 0.02
MT-ND1P03886 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND1P03886 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND1P03886 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND1P03886 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MT-ND1P03886 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MT-ND1P03886 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-ND1P03886 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-ND1P03886 AC073648.2-201ENST00000510116 352 ntBASIC15.19■□□□□ 0.02
MT-ND1P03886 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-ND1P03886 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-ND1P03886 CLEC4GP1-201ENST00000596555 870 ntBASIC15.19■□□□□ 0.02
MT-ND1P03886 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-ND1P03886 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-ND1P03886 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 AC012313.10-201ENST00000623509 926 ntBASIC15.19■□□□□ 0.02
MT-ND1P03886 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms