Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.85■□□□□ 0.29
APOEP02649 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
APOEP02649 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 AL035456.1-201ENST00000456064 1369 ntBASIC16.85■□□□□ 0.29
APOEP02649 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.85■□□□□ 0.29
APOEP02649 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.85■□□□□ 0.29
APOEP02649 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
APOEP02649 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.85■□□□□ 0.29
APOEP02649 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 PAUPAR-201ENST00000630360 2965 ntBASIC16.85■□□□□ 0.29
APOEP02649 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.85■□□□□ 0.29
APOEP02649 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.85■□□□□ 0.29
APOEP02649 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOEP02649 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 AC006449.6-201ENST00000612330 2296 ntBASIC16.84■□□□□ 0.29
APOEP02649 AC105917.1-201ENST00000506637 2539 ntBASIC16.84■□□□□ 0.29
APOEP02649 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.84■□□□□ 0.29
APOEP02649 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.84■□□□□ 0.29
APOEP02649 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.84■□□□□ 0.29
APOEP02649 CYMP-203ENST00000474680 1263 ntBASIC16.84■□□□□ 0.29
APOEP02649 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
APOEP02649 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.84■□□□□ 0.29
APOEP02649 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
APOEP02649 AC051619.7-201ENST00000568314 623 ntBASIC16.84■□□□□ 0.29
APOEP02649 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 AC093512.1-201ENST00000617969 520 ntBASIC16.84■□□□□ 0.29
APOEP02649 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
APOEP02649 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
APOEP02649 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.84■□□□□ 0.29
APOEP02649 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOEP02649 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
APOEP02649 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APOEP02649 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APOEP02649 AC007326.2-201ENST00000624224 7579 ntBASIC16.83■□□□□ 0.29
APOEP02649 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
APOEP02649 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.83■□□□□ 0.28
APOEP02649 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.83■□□□□ 0.28
APOEP02649 AC245100.5-201ENST00000452108 331 ntBASIC16.83■□□□□ 0.28
APOEP02649 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.83■□□□□ 0.28
APOEP02649 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.83■□□□□ 0.28
APOEP02649 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOEP02649 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.83■□□□□ 0.28
APOEP02649 AC140878.1-201ENST00000565277 250 ntBASIC16.83■□□□□ 0.28
APOEP02649 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.83■□□□□ 0.28
APOEP02649 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms