Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.47□□□□□ -0.09
SPTA1P02549 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 AC005252.2-201ENST00000624630 1141 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 AC012313.1-201ENST00000593393 3059 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.47□□□□□ -0.09
SPTA1P02549 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.47□□□□□ -0.09
SPTA1P02549 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.47□□□□□ -0.09
SPTA1P02549 VDAC1P7-201ENST00000462417 847 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.47□□□□□ -0.09
SPTA1P02549 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.47□□□□□ -0.09
SPTA1P02549 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 AC013467.2-201ENST00000605472 835 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.47□□□□□ -0.09
SPTA1P02549 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 CYP4F24P-201ENST00000586049 1580 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SPTA1P02549 AC016396.2-201ENST00000562575 1417 ntBASIC14.47□□□□□ -0.09
SPTA1P02549 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTA1P02549 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 MSTO2P-201ENST00000314835 1709 ntBASIC14.46□□□□□ -0.09
SPTA1P02549 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.46□□□□□ -0.09
SPTA1P02549 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.46□□□□□ -0.09
SPTA1P02549 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 AC007613.1-201ENST00000572811 2597 ntBASIC14.46□□□□□ -0.09
SPTA1P02549 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 MTX1P1-201ENST00000440904 838 ntBASIC14.46□□□□□ -0.09
SPTA1P02549 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.46□□□□□ -0.09
SPTA1P02549 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.46□□□□□ -0.09
SPTA1P02549 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTA1P02549 AC020914.3-201ENST00000594712 304 ntBASIC14.46□□□□□ -0.09
SPTA1P02549 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPTA1P02549 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPTA1P02549 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPTA1P02549 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
SPTA1P02549 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.46□□□□□ -0.1
SPTA1P02549 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
SPTA1P02549 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SPTA1P02549 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPTA1P02549 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.46□□□□□ -0.1
SPTA1P02549 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPTA1P02549 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPTA1P02549 AL603756.1-201ENST00000606511 2163 ntBASIC14.46□□□□□ -0.1
SPTA1P02549 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.46□□□□□ -0.1
SPTA1P02549 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPTA1P02549 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPTA1P02549 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPTA1P02549 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SPTA1P02549 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPTA1P02549 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms