Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT6AP02538 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT6AP02538 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
KRT6AP02538 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.6■□□□□ 0.09
KRT6AP02538 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 AC098859.1-201ENST00000502915 1238 ntBASIC15.6■□□□□ 0.09
KRT6AP02538 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 AC024267.1-201ENST00000582320 895 ntBASIC15.6■□□□□ 0.09
KRT6AP02538 AC073389.1-201ENST00000595595 795 ntBASIC15.6■□□□□ 0.09
KRT6AP02538 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.6■□□□□ 0.09
KRT6AP02538 FAM197Y3-203ENST00000618346 717 ntBASIC15.6■□□□□ 0.09
KRT6AP02538 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 AKAP8P1-201ENST00000434743 1349 ntBASIC15.6■□□□□ 0.09
KRT6AP02538 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
KRT6AP02538 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
KRT6AP02538 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
KRT6AP02538 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT6AP02538 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.6■□□□□ 0.09
KRT6AP02538 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
KRT6AP02538 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
KRT6AP02538 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.59■□□□□ 0.09
KRT6AP02538 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.59■□□□□ 0.09
KRT6AP02538 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 AC105233.2-201ENST00000523697 349 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 AF228730.5-201ENST00000530288 346 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.59■□□□□ 0.09
KRT6AP02538 AC106730.1-201ENST00000566722 1090 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 AC140113.2-201ENST00000604370 208 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 AC099522.2-201ENST00000607001 744 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 AC120114.3-201ENST00000611923 658 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
KRT6AP02538 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
KRT6AP02538 AL365209.1-201ENST00000624418 6473 ntBASIC15.59■□□□□ 0.09
KRT6AP02538 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.59■□□□□ 0.09
KRT6AP02538 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.59■□□□□ 0.09
KRT6AP02538 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.59■□□□□ 0.09
KRT6AP02538 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT6AP02538 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT6AP02538 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.09
KRT6AP02538 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
KRT6AP02538 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.58■□□□□ 0.09
KRT6AP02538 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms