Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 AC007389.4-201ENST00000454674 793 ntBASIC19.17■□□□□ 0.66
SEMA3EO15041 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.17■□□□□ 0.66
SEMA3EO15041 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.17■□□□□ 0.66
SEMA3EO15041 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
SEMA3EO15041 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.17■□□□□ 0.66
SEMA3EO15041 AC000095.1-201ENST00000603208 874 ntBASIC19.17■□□□□ 0.66
SEMA3EO15041 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SEMA3EO15041 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.17■□□□□ 0.66
SEMA3EO15041 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.17■□□□□ 0.66
SEMA3EO15041 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.17■□□□□ 0.66
SEMA3EO15041 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.17■□□□□ 0.66
SEMA3EO15041 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA3EO15041 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 TTTY23B-201ENST00000442790 549 ntBASIC19.16■□□□□ 0.66
SEMA3EO15041 GPR53P-205ENST00000457298 1084 ntBASIC19.16■□□□□ 0.66
SEMA3EO15041 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC19.16■□□□□ 0.66
SEMA3EO15041 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.16■□□□□ 0.66
SEMA3EO15041 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SEMA3EO15041 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.16■□□□□ 0.66
SEMA3EO15041 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA3EO15041 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SEMA3EO15041 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SEMA3EO15041 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA3EO15041 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.15■□□□□ 0.66
SEMA3EO15041 AC069224.1-201ENST00000566372 1715 ntBASIC19.15■□□□□ 0.66
SEMA3EO15041 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.15■□□□□ 0.66
SEMA3EO15041 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.15■□□□□ 0.66
SEMA3EO15041 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.15■□□□□ 0.66
SEMA3EO15041 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.15■□□□□ 0.66
SEMA3EO15041 KRT18P43-201ENST00000469825 1281 ntBASIC19.15■□□□□ 0.66
SEMA3EO15041 RPL13AP25-201ENST00000484130 612 ntBASIC19.15■□□□□ 0.66
SEMA3EO15041 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.15■□□□□ 0.66
SEMA3EO15041 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA3EO15041 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SEMA3EO15041 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SEMA3EO15041 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SEMA3EO15041 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA3EO15041 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SEMA3EO15041 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA3EO15041 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA3EO15041 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA3EO15041 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.14■□□□□ 0.66
SEMA3EO15041 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
SEMA3EO15041 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA3EO15041 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA3EO15041 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA3EO15041 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms