Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.28■□□□□ 0.52
ATP2A1O14983 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP2A1O14983 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATP2A1O14983 AC017083.2-201ENST00000608069 979 ntBASIC18.28■□□□□ 0.52
ATP2A1O14983 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
ATP2A1O14983 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A1O14983 ALOX12P2-203ENST00000570921 1945 ntBASIC18.27■□□□□ 0.52
ATP2A1O14983 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ATP2A1O14983 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A1O14983 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A1O14983 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A1O14983 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A1O14983 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A1O14983 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
ATP2A1O14983 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2A1O14983 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2A1O14983 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 PHKG1P2-201ENST00000457537 863 ntBASIC18.27■□□□□ 0.52
ATP2A1O14983 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A1O14983 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ATP2A1O14983 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A1O14983 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2A1O14983 RAB43P1-201ENST00000561790 589 ntBASIC18.27■□□□□ 0.52
ATP2A1O14983 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 AC015936.2-201ENST00000593177 259 ntBASIC18.27■□□□□ 0.52
ATP2A1O14983 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 RPSAP52-203ENST00000622976 1023 ntBASIC18.27■□□□□ 0.52
ATP2A1O14983 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP2A1O14983 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A1O14983 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A1O14983 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A1O14983 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A1O14983 AC005052.1-201ENST00000625181 2492 ntBASIC18.27■□□□□ 0.51
ATP2A1O14983 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A1O14983 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A1O14983 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A1O14983 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP2A1O14983 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ATP2A1O14983 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 FLJ38576-201ENST00000623820 2459 ntBASIC18.26■□□□□ 0.51
ATP2A1O14983 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP2A1O14983 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATP2A1O14983 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2A1O14983 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP2A1O14983 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP2A1O14983 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP2A1O14983 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2A1O14983 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP2A1O14983 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP2A1O14983 BRI3BPP1-201ENST00000594224 787 ntBASIC18.26■□□□□ 0.51
ATP2A1O14983 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP2A1O14983 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A1O14983 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP2A1O14983 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A1O14983 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ATP2A1O14983 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
ATP2A1O14983 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 TMEM14DP-201ENST00000422205 345 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms