Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM1O00151 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 AC021087.4-201ENST00000563761 564 ntBASIC15.38■□□□□ 0.05
PDLIM1O00151 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM1O00151 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.38■□□□□ 0.05
PDLIM1O00151 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 GPAA1P2-202ENST00000606848 1787 ntBASIC15.38■□□□□ 0.05
PDLIM1O00151 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
PDLIM1O00151 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 AC020658.6-201ENST00000623564 1870 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 LINC01144-201ENST00000626198 1710 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 BEND3P1-201ENST00000421591 1944 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.37■□□□□ 0.05
PDLIM1O00151 RNPS1P1-201ENST00000507437 918 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 RNA5SP419-201ENST00000515908 135 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 AL662844.1-201ENST00000546340 181 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PDLIM1O00151 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.37■□□□□ 0.05
PDLIM1O00151 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 AC064862.7-201ENST00000604520 867 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 AC025062.2-201ENST00000605477 670 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 AL022326.1-202ENST00000641533 845 ntBASIC15.37■□□□□ 0.05
PDLIM1O00151 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.37■□□□□ 0.05
PDLIM1O00151 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.37■□□□□ 0.05
PDLIM1O00151 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM1O00151 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM1O00151 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 AC107918.4-201ENST00000641966 3141 ntBASIC15.36■□□□□ 0.05
PDLIM1O00151 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PDLIM1O00151 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.36■□□□□ 0.05
PDLIM1O00151 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.36■□□□□ 0.05
PDLIM1O00151 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.36■□□□□ 0.05
PDLIM1O00151 AF186996.4-201ENST00000467186 377 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms