Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX39AO00148 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
DDX39AO00148 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
DDX39AO00148 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX39AO00148 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
DDX39AO00148 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
DDX39AO00148 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.02■□□□□ 0.48
DDX39AO00148 SPTLC1P1-201ENST00000447199 261 ntBASIC18.02■□□□□ 0.48
DDX39AO00148 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX39AO00148 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.02■□□□□ 0.48
DDX39AO00148 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX39AO00148 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX39AO00148 AC004461.2-201ENST00000629517 803 ntBASIC18.02■□□□□ 0.48
DDX39AO00148 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX39AO00148 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX39AO00148 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX39AO00148 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.02■□□□□ 0.47
DDX39AO00148 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX39AO00148 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.02■□□□□ 0.47
DDX39AO00148 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX39AO00148 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX39AO00148 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.01■□□□□ 0.47
DDX39AO00148 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
DDX39AO00148 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 FER1L4-210ENST00000615531 5998 ntBASIC18.01■□□□□ 0.47
DDX39AO00148 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DDX39AO00148 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX39AO00148 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
DDX39AO00148 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
DDX39AO00148 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18■□□□□ 0.47
DDX39AO00148 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18■□□□□ 0.47
DDX39AO00148 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18■□□□□ 0.47
DDX39AO00148 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18■□□□□ 0.47
DDX39AO00148 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18■□□□□ 0.47
DDX39AO00148 AL589987.1-201ENST00000453380 819 ntBASIC18■□□□□ 0.47
DDX39AO00148 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18■□□□□ 0.47
DDX39AO00148 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DDX39AO00148 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms