Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.49■□□□□ 0.39
CCDC66A2RUB6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 AL353732.1-201ENST00000569618 1459 ntBASIC17.49■□□□□ 0.39
CCDC66A2RUB6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 AC007191.1-201ENST00000623179 2995 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 LINC01144-201ENST00000626198 1710 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TSPY19P-201ENST00000418461 509 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TSPY18P-201ENST00000441642 509 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 POU5F1P6-201ENST00000466990 990 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 AC006557.2-201ENST00000592985 1240 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 CYP2A7P1-201ENST00000595391 815 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 REXO1L6P-202ENST00000619970 1078 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SLC22A20-204ENST00000530038 1673 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.48■□□□□ 0.39
CCDC66A2RUB6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC66A2RUB6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 ELK2BP-201ENST00000415014 1224 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 LAGE3P1-201ENST00000425356 484 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 PMS2P1-201ENST00000431037 1228 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms