Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 KRT16P4-201ENST00000453883 522 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC106795.1-205ENST00000512851 1056 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 RN7SL850P-201ENST00000579959 291 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 ST20-AS1-201ENST00000560255 4223 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC105250.1-201ENST00000509378 2057 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC026748.1-201ENST00000624349 3251 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC129492.6-201ENST00000611383 1305 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC007686.3-201ENST00000619017 3487 ntBASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AC091951.1-201ENST00000512854 2465 ntBASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AC092127.1-201ENST00000567093 3455 ntBASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV18A0A075B6X5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 AC007292.2-201ENST00000593524 1812 ntBASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 MIR3180-1-201ENST00000580374 94 ntBASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 MIR3180-3-201ENST00000584616 94 ntBASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV18A0A075B6X5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms