Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.33■□□□□ 0.05
LRCH1Q9Y2L9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LRCH1Q9Y2L9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRCH1Q9Y2L9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.33■□□□□ 0.05
LRCH1Q9Y2L9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 AC010654.1-201ENST00000615722 808 ntBASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH1Q9Y2L9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 SPDYE13P-201ENST00000445314 798 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 AC079602.3-201ENST00000623931 403 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms