Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 RPL37AP1-201ENST00000412502 279 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AC092580.3-201ENST00000430932 139 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AC067863.1-201ENST00000494933 530 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AL079307.3-201ENST00000556114 283 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AC140878.1-201ENST00000565277 250 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AL589739.1-201ENST00000607720 493 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AL138828.2-201ENST00000615812 383 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 AC011477.6-201ENST00000604980 1927 ntBASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
DTX4Q9Y2E6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 FO538757.1-201ENST00000623083 1397 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 KRT8P37-201ENST00000451609 1420 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 SPDYE17-201ENST00000412399 783 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 EEF1DP4-201ENST00000446006 880 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AC069120.2-201ENST00000524091 540 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 AC022188.1-201ENST00000620960 1664 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 LINC00554-201ENST00000564841 3011 ntBASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DTX4Q9Y2E6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DTX4Q9Y2E6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DTX4Q9Y2E6 CETN4P-206ENST00000642099 2168 ntBASIC14.85□□□□□ -0.03
DTX4Q9Y2E6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DTX4Q9Y2E6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms