Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 AL139384.1-201ENST00000612143 3047 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 FAM197Y7-201ENST00000432892 766 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 AC245884.6-201ENST00000515672 1067 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 HNRNPUP1-201ENST00000554987 333 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 AC000095.1-201ENST00000603208 874 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 AC097724.1-201ENST00000609581 426 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 CU633904.3-201ENST00000624042 1029 ntBASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H4Q9UPT8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 CD8B2-202ENST00000417670 633 ntBASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 AL096828.3-201ENST00000615354 462 ntBASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H4Q9UPT8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 U82695.1-201ENST00000635752 1889 ntBASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 SLED1-202ENST00000512051 380 ntBASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AC126915.1-201ENST00000522847 1038 ntBASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 AC132938.4-201ENST00000623835 848 ntBASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 NKILA-202ENST00000614771 2598 ntBASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H4Q9UPT8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H4Q9UPT8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H4Q9UPT8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.21■□□□□ 0.67
ZC3H4Q9UPT8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ZC3H4Q9UPT8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H4Q9UPT8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms