Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 AC020658.6-201ENST00000623564 1870 ntBASIC18.46■□□□□ 0.55
USP25Q9UHP3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 AL009183.1-201ENST00000603760 355 ntBASIC18.46■□□□□ 0.55
USP25Q9UHP3 AC010507.1-201ENST00000633895 436 ntBASIC18.46■□□□□ 0.55
USP25Q9UHP3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.46■□□□□ 0.55
USP25Q9UHP3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP25Q9UHP3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
USP25Q9UHP3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 AC092919.2-201ENST00000623631 1645 ntBASIC18.45■□□□□ 0.54
USP25Q9UHP3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 SLC25A6P4-201ENST00000586535 553 ntBASIC18.45■□□□□ 0.54
USP25Q9UHP3 AC023141.13-201ENST00000604991 943 ntBASIC18.45■□□□□ 0.54
USP25Q9UHP3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP25Q9UHP3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.45■□□□□ 0.54
USP25Q9UHP3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 AC092474.2-201ENST00000424288 719 ntBASIC18.44■□□□□ 0.54
USP25Q9UHP3 AC093724.1-201ENST00000448659 1027 ntBASIC18.44■□□□□ 0.54
USP25Q9UHP3 KRT18P34-201ENST00000488218 1270 ntBASIC18.44■□□□□ 0.54
USP25Q9UHP3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 Z83851.2-201ENST00000609564 659 ntBASIC18.44■□□□□ 0.54
USP25Q9UHP3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP25Q9UHP3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USP25Q9UHP3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.43■□□□□ 0.54
USP25Q9UHP3 AC026748.1-201ENST00000624349 3251 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms