Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AC133539.2-201ENST00000604757 467 ntBASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AC005052.1-201ENST00000625181 2492 ntBASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 AC018665.1-201ENST00000622927 1362 ntBASIC16.64■□□□□ 0.26
DNMT3BQ9UBC3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DNMT3BQ9UBC3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 BOLA2P3-201ENST00000404566 256 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 FAM86LP-201ENST00000478302 853 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 AC104989.1-201ENST00000519711 778 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 SLC25A47P1-201ENST00000531577 414 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 AL359711.2-201ENST00000563105 872 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 AC233724.13-201ENST00000598383 410 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 CU634019.7-201ENST00000624153 1185 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 FP236241.2-201ENST00000624906 1185 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 MST1L-201ENST00000442552 2185 ntBASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.64■□□□□ 0.25
DNMT3BQ9UBC3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 KRT18P64-201ENST00000434946 1219 ntBASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC092658.1-201ENST00000505836 891 ntBASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 BRI3BPP1-201ENST00000594224 787 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms